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Introduction
Download & Install
Documentation
Getting Started
Data Preparation
Images
Segmentation
Marker Table
CellType Table
Installation
MacOS
Windows
Launch CellTune
Project Setup
Projects
Viewer & Interface
Interface
Legends & Hover
Segment Controls
Toolbars
Keyboard Shortcuts
Populations
Labeling
Features
Data Exploration
Initial Clustering
Plot Expression
Phenotype Clustering
Gating
Landmarking
Manual Landmarking
Automated Landmarking
Clustering-Based
Other Landmarking
Classification
Classifier
Add Labels
Training
Plot Confusions
Sampling
Review & Curation
Export
Export Populations
Export CellTable
Export Images
Tutorials
Getting Started
Download Demo Data
New Project Setup
Viewer & Interface
Features
Populations
Gating
Intro to Gating
Advanced Gating
Landmarking
Manual Landmarking
Automated Landmarking
Clustering-Based
Classification
Classifier
Add Labels
Training & Predictions
Plot Confusions
Sampling
Labeling & Review
Labeling Basics
Review
Refining CellTypes
Export
Additional Tutorials
Whole Slide Example
FAQ
CellTuneDepot
Citation
Contact
Tutorials
Classification
Plot Confusions
Plot Confusions
Plot a confusion matrix showing the agreements and disagreements between the two models trained.
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You can optionally filter out images prior to plotting.